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The MH contain a catalytically essential, labile (cyanolyzable) sulfur atom, and require shared accessory proteins for enzyme maturation [ 11].
The differences between the clades based on the accessory genome and the phylogeny was visualised by creating heat-maps of the shared accessory genes between isolates.
In addition, hierarchical clustering of the strains based on their shared accessory genome content, does not group strains by clinical status.
COG information for the homology groups was obtained using the protocol detailed in Additional file 2. Heat-maps of the shared accessory between isolates, were created using R and the R libraries vegan [ 98], gplots [ 99] and Heatplus [ 100].
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COG and pfam designations from IMG for each genome were used to determine shared and accessory functions across the 12 Clostridial phage genomes.
To assess the specificity of cadherin expression to cranial motor nucleogenesis, we asked whether misexpression of cadherins shared by accessory abducens and facial motor neurons perturbed their segregation.
Thus, as the nematode is well-suited to automated screens (Kurz and Ewbank 2007; Garvis et al. 2009), we used it to look for new S. marcescens virulence factors and to determine whether genes associated with virulence were within the shared or accessory gene sets.
They alltion Offersharedok intwoIcons' Inner Lives.
What is missing, housing advocates say, are homes for people who can afford only a little bit of space; living quarters large enough for four or more unrelated adults to share; and "accessory dwellings" for people who want to live close to family members who own single-family houses.
The mature peptides of oxytocin and vasopressin are highly similar, and they share an accessory protein, neurophysin, yet the other domains have little similarity in sequence.
Mosaic patterns were observed in the shared presence/absence of accessory genome content among isolates.
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