Comparing with the SSR markers in MaizeGDB database, there were 18 606 SSR markers, accounting for 16.6% of the newly developed SSR markers, shared the same loci with the public SSR markers with various motifs.
A total of 1556 SSR markers from the MaizeGDB database have specific location, and 16.6% of the newly developed SSR markers shared the same loci with public SSR markers.
With SNP data from multiple species, one can study the sharing of genetic material at the same loci, providing a new means of studying species divergence by the speed of loss of genetic coherence.
This means that these three British Chinese pairs represent very distant genetic relatives and their shared vrGVs located in the same locus are IBD and are in linkage disequilibrium with each other.
Consistent with these observations, I found that satellite copies of the same locus share the same substitutions (supplementary fig. S2, Supplementary Material online), and the genetic distance between copies from the same locus is lower than the distance between copies from different loci (fig. 1 a).
The O(n) words ending at the branching nodes and leaves of the suffix tree represent a compendium of all the substrings of the input string x, and each node or leaf represents an equivalence class, in the sense that strings with the same locus share the same set of starting positions.
Since, in general, the three homoeologues of the same locus share high sequence similarity [ 56], we employed a novel strategy to minimize the work load and to handle, simultaneously, as many family members as possible.
These two genes are localized in the same locus, sharing the common exons 2 and 3, but differing in their first exons and their respective promoters.
They are located at the same locus and share flanking sequence homology, suggesting that these restriction cassettes exchange with each other and establish two distinct epigenetic states.
Here we highlight a small network formed by substrates of matriptase and furin which share the same subcellular loci as the enzyme.
