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Several transcripts for ethylene induced signaling or transcription factors (e.g. ER4, ER2) were enhanced by up to 40-fold.
If there were several transcripts for one gene, we took the most 5' annotated transcriptional start site and the most 3' annotated transcriptional termination site to construct the longest possible transcript.
We detected several transcripts for key genes involved in the nodulation signalling pathway.
Several transcripts for proteins that consume intracellular ROS were up-regulated.
Several transcripts for meiotic genes related to chromosome maintenance and behavior are altered.
Interestingly, several transcripts for metalloproteinase 1 (collagenase 1) which are important in extracellular matrix turnover were also identified.
Similar(49)
In addition to the sleep-related genes that appeared in the top-ranked fold-change lists, we also found significant differential expression for several transcripts of the brain-specific marker for sleep homeostasis Homer1.
This is strongly supported by the data we obtained in an in vitro microarray study, where several transcripts encoding for proteins required for angiogenesis are induced upon low-dose IR delivery (data not shown).
Similarly, the fact that several transcripts coding for proteins involved in transport, transferase activity and in the transcription control machinery were also abundant at dusk (ZT16) and during the night (ZT20) (Figure 1B) indicates that, during the hours of darkness, synthesis of these proteins is still active.
Among the downregulated genes with known functions were several transcripts coding for secreted proteins: amphiregulin, CYR61, thrombospondin, CXCL12, VEGF-C, as well as the pro-proliferative genes MYC and cyclin D1.
Related to the sugar meal are several transcripts coding for glycosidases similar to proteins annotated as maltase and amylase.
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