Sentence examples for several layout algorithms from inspiring English sources

To help the researchers to understand more easily the interactions in biological pathways where several layout algorithms have been developed.

Last, it supports several layout algorithms such as the rectangular, slanted, circular and radial views.

The yFiles Organic layout (ORL) is a proprietary closed-source implementation of the force-directed placement paradigm, which combines elements from several layout algorithms to facilitate identification of clusters of tightly connected network modules [ 20], hence sharing the same objective with the MLL-C.

Alternative tools for graph visualization also used in the scientific community include Ondex [4] and yEd [5], which also implement several graph layout algorithms.

So far several circular layout algorithms have been developed to distribute network nodes on a ring based on various measures such as edge crossings, compactness and deviation angles, while they have not intensively pursued the application to a large-scale network with thousands of nodes, because the circular ring is too narrow to accommodate a huge number of nodes[6], [15], [16].

We implemented several simple layout algorithms to distribute the nodes on each layer; for example, nodes can be distributed randomly, on a 2D grid, spherically, or on a circle.

To further support comparative data evaluation (i.e. the comparison of flux distributions) and automatic layout, VANTED provides different chart types (e.g. pie and bar plots) facilitating direct data comparison and offers several graph layout algorithms (e.g. force-directed, hierarchical and circular layouts) to automatically arrange the network elements.

Several graph-based layout algorithms exist for the visualization of graphs in an aesthetically pleasing way [64].

We applied several force-directed layout algorithms to those networks.

FluxMap supports several automatic layouting algorithms such as the DOT-layout and additionally offers flux-specific layouts including the functionality for splitting nodes with a high degree of connectivity.

As such layout of the pathway maps can be aided by use of various automated layout algorithms.