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To determine the modified position of the E2 B domain in these two complexes, the cryoEM density distributions were modified by setting to zero all density that was within 3 Å of all atoms in E1 and of all atoms in the A, C and D domains of E2.
For instance, trying to do a "practical pseudo-inverse" of the linear transform, by setting to zero the small singular values and inverting the rest is quite arbitrary for two reasons: (1) the choice of the considered threshold, and (2) the fact of using an all-or-nothing weighting function for the singular values.
In a region of smoothness, once the numerical solution is resolved to our satisfaction at a certain locality of some grid, then the prediction errors there for this grid and all finer ones are small; this enables us to obtain data compression by setting to zero the terms of the multiresolution representation that fall below a specified tolerance.
We incorporate the effect of scene changes by setting to zero.
Setting to zero their coefficients yields the following set of algebraic equations: (3.8).
Setting to zero the partial differentiation of this approximate log-likelihood function with respect to CFO yielded the CFO estimate.
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W is set to zero.
Anywhere this happened, the precipitation was set to zero.
The diagonal elements of are set to zero.
Algorithm 3: Algorithm DBA.
Fermi level is set to zero.
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