Sentence examples for sets of reads from inspiring English sources

In other words, for each pepper line we obtained six Velvet assemblies (3 k-mers settings by 2 sets of reads) that were combined with CAP3 software yielding a super assembly.

We simulated reads from the human genome by creating sets of reads with a fixed number of variants.

With these sets of reads, Atlas ran Phrap on each bucket to build contigs and then arranged the contigs into scaffolds using mate pair information.

However, merging the nodes involves also merging the sets of reads, possibly incorporating new reads which allows the process to continue.

We first train the simulator using the quality scores from our test data and then generate 100 different sets of reads (each with around 52 million reads) from the reference genome based on the adopted quality scores.

These read sets are constructed by first finding all reads that overlap each particular clone, and then performing intersection and subtraction operations on the sets of reads to isolate smaller regions.

The first stage of assembly constructs sets of reads that span regions much shorter than a clone length — this is a crucial feature for overcoming the challenge of assembling a highly repetitive genome with short reads.

In the first stage we create read sets that consist of sets of reads that we localize within small subregions of each clone; we assemble each read set independently.

SimHC contains 113 sets of reads from various microbial genomes.

SNPs were discovered between the two sets of reads.

As two sets of reads were combined into a whole animal, this may have created artifacts.