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Whole genome sequencing and RNA-seq analysis of the evolved strains revealed different sets of genome alterations suggesting a divergence in adaptation to these two acids.
More than 65 percent of HCEs are located in the genic region in one set of genome(s) but in the intergenic region of other sets of genome(s).
Computing efficiency is essential for concurrent analysis of large sets of genome sequences [43].
Two sets of genome pairs were selected for the target depths of 0.03 and 0.075 (P1 and P2, respectively).
Through the simplicity of its API, we envision making low-level analysis of large sets of genome sequencing data accessible to a wider range of researchers.
When we repeated this analysis for exonic repeats, we observed a similar enrichment in repeats that varied in their copy number between the two sets of genome pairs.
Similar(48)
Whole mitochondrial genomes provide not only more general genetic information than shorter sequences of individual genes such as the COI gene, but also sets of genome-level characters, such as the relative position of different genes, structural genomic features and compositional features [ 1, 2, 11, 12].
Studying gene expression changes in allopolyploids is more complicated than in autopolyploids, because allopolyploids contain more than two sets of genomes originating from divergent, but related, species.
For budding yeast, several sets of genome-wide protein-protein interaction data are available.
This PWM was used to calculate scores for sets of genome-random, repeat-random and matrix-random sequences.
In our method, the families are identified based on branch stability in the bootstrap trees derived from overlapping input sets of genome-wide miRNA precursor sequences.
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CEO of Professional Science Editing for Scientists @ prosciediting.com