Sentence examples for sets of alignments from inspiring English sources

In the case of submitting sequences, they are first combined together, aligned using MUSCLE (Edgar, 2004) and then split into two separate sets of alignments.

Cumulative Relative Entropy (CRE) calculated for these two sets of alignments enabled us to selectively identify conserved residues of not only CaMdr1p but for the entire DHA1 family.

Two sets of alignments were considered for the phylogenetic analyses.

We applied the same processing and analysis steps to both sets of alignments.

The most promising sets of alignments are considered for further processing.

Their RFC scores are close to those of the known protein-coding genes in all four sets of alignments.

In practice we used two sets of alignment filters and kept alignments that passed one or both sets.

Yet, the different sets of alignment parameters investigated here do not have similar tolerance for highly divergent reads.

Stitch: automated and manually edited assemblies Tcas5.1 is the output of Stitch (version 1.4.4) run for five iterations with two sets of alignment filters.

It performs sequence alignments using the program MAFFT [ 84] using different sets of alignment parameters to create three different alignments for each gene family and culls [ 85] alignment ambiguous regions.

Comparison of mean and range (95% posterior density distribution) of divergence time estimates for selected outgroup and Crenadactylus nodes based on Bayesian dating analyses (BEAST) of three different sets of alignment data.