Sentence examples for set variation from inspiring English sources

Hanzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-seq data.

Hänzelmann, S., Castelo, R. & Guinney, J. GSVA: gene set variation analysis for microarray and RNA-seq data.

The gene set variation analysis (GSVA) scores were calculated from uncentered gene-expression data; GSVA scores were transformed to z-scores and the mean z-score of the signatures was obtained58.

The action set variation includes choices in which the dictator can 'take' money from the other player.

To identify estrogen-independent genes that might be useful to identify subtypes of ER + breast tumors, we calculated between/within (b/w) scores for each probe set, which were measurements of probe set variation observed between different primary tumors relative to the variation observed within paired samples pre- and post-treatment.

Real gene expression data were transformed to gene set profiles using two different GSA approaches (i) single sample and (ii) pairwise test which were computed using the Bioconductor packages gene set variation analysis (GSVA) and GSEAlm (Oron et al., 2008), respectively.

Therefore, we need to define suitable data set variations.

Previous work with the eQTL population or accession data suggested that any relationship between probe level variation and transcript level variation while significant was minimal in comparison to the probe sets variation [31], [39].

Since the set-to-set variation decreases with random database size, we believe having only one run using a 1 giga-residue random database does not greatly increase the uncertainty in the statistical accuracy of Mascot after calibration.

Grander still are two "Interludium" movements, mammoth variation sets: 69 variations in the first and 81 in the second, which alone lasts about an hour.

In the VAS data set, the variation came only from batch and Profile effects.