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Since this output is not practical to use for larger gene sets, it is usually incorporated into a second pass through the data with a subset of the original gene set tested for drill down purposes (for an example of the output of this process, see Fig. 3D below).
SNPs within the set tested for ASE (n = 8145) were divided into deciles based on total read depth.
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The proportion of permutations in which the gene set analysis p-value is smaller than the gene set p-value in the original data provides the empirical estimate of the p-value for the gene set test for association.
ROAST is a self-contained gene set test for complex designed microarray experiments.
The 14-step mechanism performs as good as the 23 species mechanism for all the experimental data sets tested for.
In this real-world setting, testing for inherited thrombophilia is frequently at odds with the recommendations of the CAP consensus conference.
Testing program staff originally set test Charlie for early 1947.
The complete set was tested for Geneset enrichment using Parametric analysis of Gene set enrichment (PAGE, [54]).
The complete set was tested for Geneset enrichment using Parametric analysis of Gene set enrichment (PAGE, [18]).
To this data set tests for association between hosts and pathogens (see Methods) were applied.
Each set was tested for moisture content, ash content, gross calorific value, relaxed density and shatter index, respectively.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com