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We then tested the ability of each method to distinguish the stronger binding peptide among a pair of peptides randomly held out from the training peptide set (run for all possible peptide pairs, either two binders or a binder and a non-binder) and generated a percentage success rate for each of the 23 PDZ domains that bound at least 10 peptides.
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The eudicot data set ran for 20 million generations with four MCMC chains (t = 0.2) and two independent runs with trees sampled every 100th generation.
Set running environment for 3dRPC.
The large data set ran for 50 million generations with six MCMC chains (temperature (t) = 0.2) and four independent runs with trees sampled every 1000th generation.
His lawyers could demand further investigations, which could set back further a case which already looks set to run for years.
In contrast to the BI on the full data set, two Markov chains for each pruned data set were run for 30,000 instead of 60,000 generations using PhyloBayes MPI v1.4f (CAT-GTR).
The mcmc analyses were then set to run for 5 million generations for the single gene data sets, and 10 million generations in case of the concatenated data set, respectively.
The project is set to run for four weeks.
It was set to run for 48 hours.
The trial is set to run for six weeks.
Reports alleged that Clooney was set to run for for Governor of California, following in the footsteps of the illustrious Arnold Schwarzenegger.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com