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Additional information about T. gondii genes and gene lists were provided by Jeroen Saeij (MIT) who had independently culled additional gene set information from the proteomics and gene expression literature as well http://www.toxodb.org.
Concerning performance of queries, the first selection step from the table storing all probe set information from a group comparison is based on the index pointing to the name of the group comparison.
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Probe set information was retrieved from Harvest: Citrus database http://harvest.ucr.edu, http://www.harvest-web.org.
Results: We propose a Bayesian model that provides a coherent framework for joint modeling of both gene set information and gene expression data from multiple studies, to improve the detection of enriched gene sets by leveraging information from different sources available.
Setting: Information submitted to the UDSMR from 1994 through 1996 by 167 hospital and rehabilitation facilities from 40 states was examined.
Setting: Information submitted to the Uniform Data System for Medical Rehabilitation from 1997 and 1998 by 167 hospital and rehabilitation facilities from 40 states was examined.
The old boundaries were set using information from the 1990 census and a definition from the Office of Management and Budget as to what constitutes an urban area.
This project aims to delineate a "lithium predictor tool set" integrating information from genome-wide association study (GWAS) data and transcriptomic analyses.
inference of haplotypes and imputing untyped genotypes in the test set using information from the best fit haplotypes derived from the reference panel.
Using cancer registration records as the base data set, additional information from Hospital Episodes Statistics, National Cancer Waiting Times and National Health Service screening programmes data (for breast, bowel and cervical cancers) were linked at person-tumour level.
One prediction set contained similar information to calibration set while the other prediction sets contained different information from calibration set in order to assess the model accuracy and robustness.
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