Sentence examples for set downloaded from inspiring English sources

To accomplish this, we used BLAT (Kent 2002) to align the 69mer microarray probe sequences to the consensus gene set downloaded from SilkDB (Duan et al. 2010).

We investigated the extent to which the annotated CpG islands overlapped with each of the three types of promoter in the six higher vertebrate genomes using the CpG islands data set downloaded from the UCSC annotation database.

The Z. filipendulae sequences were BLASTx searched against a D. melanogaster protein set, downloaded from Flybase (December 2008) http://flybase.org[ 48], and against the B. mori consensus gene dataset downloaded from the silkworm website http://silkworm.genomics.org.cn (November 2008) [ 49].

The remaining Arabidopsis genes were classified as expressed genes or hypothetical genes according to the gene set downloaded from TAIR7 release [ 31] which had at least one supporting cDNA and/or EST.

We also tested our method by applying it to a publicly available non-small-cell microarray data set downloaded from National Center for Biotechnology Information Gene Expression Omnibus (GSE14814).

Physical protein-protein interactions (PPI) and genetic interactions (GI) were collected from the Database of Interacting Proteins (DIP) small-scale experiment set (downloaded March 2003) [30], BioGRID (downloaded on June 2006) in which all interactions are supported by literature curation [29] and literature collection by MIPS [43].

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