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Radio box Gene set database KEGG, BioCarta, GO biological process, GO molecular function, GO cellular component, customized KEGG, BioCarta, GO biological process, GO molecular function, GO cellular component The pathway/gene set database used for PBA search.
Twenty-three compounds with their in vitro biological activities (IC50 values) against Crytococcus neoformans were used to generate the training set database of compounds for the CoMFA studies.
Sample pairs of left and right iris images of the IITDv1 database are depicted in Fig. 4. Table 1 Overview of employed databases, corresponding number of subjects, iris images, and the resulting number of genuine and impostor comparisons Set Database Subjects Images Gen. Imp.
The gene set database used in the analysis is established based on prior biological knowledge.
The curated gene set library including 1892 gene sets was downloaded from a gene set database, MSigDB [15].
An in silico core gene set database was constructed from these genomes based on the 63 ubiquitous genes identified by Koonin [14].
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Such an analysis could also be applied to larger, curated gene set databases to aid in generating hypotheses about potential pathways to target in RAS-driven cancers.
Although many efforts have been made to build gene set databases (e.g. KEGG, Biocarta, Reactome, or the Gene Ontology database), and significant work has been done to expand the current knowledge of gene functions and roles in cellular systems, many human genes are not yet annotated in existing gene set databases.
Finally, identified modules are queried against gene set databases such as the GO gene sets and Transcription Factor Binding Site (TFBS) gene sets to infer biological processes and regulatory mechanisms underlying the phenotype of interest.
Setting: Database of claims submitted to the Virginia WCC.
Setting Database maintained by the Cochrane IPD Meta-analysis Methodsupplementedplemented by records of published IPD meta-analyses held in a separate database.
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