Calibration in the large is the intercept term in an intercept-only logistic regression model for the binary outcome with the linear predictor set as an offset term.
The limit for the acceptance or removal of the new terms was set as 0.05.
Following a procedure described in greater detail below, we clustered the enriched terms based on such associations, and selected the most highly connected terms in the resulting graph as representatives for the enriched term set as a whole.
We use the average IC value of the given term set as a performance measure to compare the specificity.
Carbamidomethylation of cysteines was set as fixed modification and oxidation of methionine; dimethyl "light" label (K and N-term) and dimethyl "heavy" label (K and N-term) were set as a dynamic modifications.
Mr. Fry dismissed the buzz word terroir — a debated French notion that fine wine can express its unique soil and setting — as "a marketing term".
Carbamidomethyl (C) was set as a fixed modification, Acetyl (Protein N-term), Deamidated (NQ), Oxidation (M), Dimethyl (K), Dimethyl (N-term), Dimethyl:2H(4) (K), Dimethyl:2H(4) (N-term), Dimethyl:2H 6 13C 2) (K), Dimethyl:2H 6 13C 2) (N-term) as variable modifications.
Carbamidomethyl (C) was set as a fixed modification, Acetyl (Protein N-term), Deamidated (NQ), Oxidation (M), Dimethyl (K), Dimethyl (N-term), Dimethyl: 2H(4) (K), Dimethyl: 2H(4) (N-term), Dimethyl: 2H 6 13C(2) (K), Dimethyl: 2H 6 13C(2) (N-term) as variable modifications.
The volume translation term is set as a constant to ensure the accuracy of the saturated liquid density at low reduced temperatures.
A binary classification of short-term and long-term survival was set as a pilot task.
