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In our SVD analysis on Arabidopsis data set, array experiments that contributed most as the principal components included stamen development, germinating seed and stress responses on leaf.
We used the "27 K" high-density hBAC Sub Megabase Resolution Tiling (SMRT) set array CGH (BCCRC, Vancouver, BC), which contains two replicates for each clone and has a resolution of 70 80 Kb.
The difference in these results is probably due to the set array lengths chosen by each group.
In order to test the utility of the resulting SNP set, array based genotyping was performed to determine levels of polymorphism within 23 domestic breeds and two wild sheep species.
Glass spotted microarrays (Human known gene SGC oligo set array number 1) were obtained from the Human Genome Mapping Project.
Load was manipulated by varying the number of items in the memory set array (one in the low-load and four in the high-load conditions).
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This accuracy was the same whether the training set arrays were from the same or different batch than the test set.
The probe set arrays were then washed and stained using the FS450_0003 fluidics protocol, and scanned using an Affymetrix 3000 7G scanner.
All those indexing variants can also be used for setting array data, for example: Allowed types for input data are scalars, tuples, lists, numpy ndarrays and distributed_data_objects.
The GeneChip Arabidopsis tiling array set (1.0F Array and 1.0R Array; Affymetrix, Santa Clara, CA) was used (Zhang et al. 2006).
The GeneChip Arabidopsis tiling arrays set (1.0F Array and 1.0R Array, Affymetrix) was used.
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