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sequential window acquisition of all theoretical fragment ion mass spectra.
Indeed, a recent landmark paper demonstrated reproducible detection and quantification of over 2000 proteins from 18 clinical biopsy samples by utilizing novel pressure cycling technology and sequential window acquisition of all theoretical fragment ion mass spectra (SWATH-MS) [39].
Peptides were dissolved in 0.1% formic acid and analyzed by MS in SWATH (the sequential window acquisition of all theoretical mass spectra) mode.
Recently, sequential window acquisition of all theoretical fragment-ion spectra mass spectrometry (SWATH-MS) has come to the forefront of new developments in mass spectrometry.
One way of performing data-independent acquisitions is by using sequential window acquisition of all theoretical fragment-ion spectra (SWATH™) MS, in which repeated cycling of a 25 Da precursor isolation window is used in a single analysis to obtain time-resolved fragment ion spectra for all analytes detectable within a user defined mass-to-charge ratio (m/z) precursor range.
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Sequential windowed data independent acquisitionof the total high-resolution mass spectra.
The spectrograms of the echoes were calculated with a Hann window and a 90% overlap between sequential windows.
Sequences imported into the PRFdb are also folded using sequential windows across the entire sequence in order to create a graphical minimum free energy 'landscape.' This enables users to submit longer or shorter sequence strings for computational folding, a particularly useful feature e.g. for eliminating extraneous sequence that may not be involved in actual RNA folding.
Figure 5 shows that P δ, which is the energy ratio of two sequential sample windows, is at a maximum at every 96 ms, which is the duration of every single transmission frame in the T-DMB.
This is called coarse frame synchronization, and the process is as follows: Two sequential sample windows are set on a received T-DMB intermediate frequency (IF) signal to calculate the energy sum for corresponding signals as shown in Figure 4. Figure 4 Sample windows for the coarse frame synchronization.
The genome was analyzed by construction of sequential 3Kb windows in which the read count between cultures from the two age groups were compared.
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