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Contiguous sequences assembled from sequencing reads.
Langmead, B. Aligning short sequencing reads with Bowtie.
Deconvolution and assembly of sequencing reads from a metagenomic sample.
Sequencing reads were de novo assembled using dipSPAdes46.
We mapped the sequencing reads to the pan-genome sequences.
Quality control of sequencing reads was performed using FAstQC.
Long sequencing reads offer unprecedented opportunities in analysis and reconstruction of complex genomic regions.
We have extended the SHAPEIT2 method to use phase-informative sequencing reads to improve phasing accuracy.
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Average sequencing read length was ~710 nucleotides.
Sequencing read counts are in millions.
Over 96% of the annotated genes had supporting mRNA-sequencing reads (Supplementary information, Figure S4C).
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