Sentence examples for sequencing in parallel from inspiring English sources
The somatic genotype of the tumor can be fully characterized by sequencing in parallel (from non-tumor DNA) also the inherited genome of the patient: thus, the issue of inherited variation versus acquired somatic mutation can be rigorously circumvented.
The pioneering so-called 2G NGS platforms available at the time of writing are based on sequencing, in parallel, vast numbers of genome fragments sheared into lengths of approximately 35 400 bp.
They also illustrate the advantage of sequencing, in parallel, ESTs from subtracted libraries, which are enriched in clones not found in cDNA libraries and are a valuable source of new genes.
Given a 250 bp amplicon and assuming 12,000 reads of ~250 bp length per 1/16th segment of a GS FLX sequencer picotiterplate (GS FLX amplicon protocol), 16 PCR products can be sequenced in parallel with 12,000× coverage.
Finally, the algorithm can run these sequences in parallel m number of times obtaining m imputed data sets.
In addition, transactional memory has the ability to execute atomic code sequences in parallel as long as no data conflicts occur.
Recently, two new droplet-based RNA-seq technologies, named as Drop-seq and inDrop (indexing droplets), has been exploited to sequence in parallel thousands of single cells from a tissue [62, 63].
The read length of these NGS platforms is shorter than the original Sanger method (~250 bp for 454 and 35 to 50 bp for Solexa and SOLiD) but ideal for small RNA sequencing: 454 can produce >400,000 reads in one run; Solexa and SOLiD are capable of generating even tens of millions of sequences in parallel [66].
It has been recommended in [3] and reinforced in [4] that in order to prevent possible correlations between output sequences in parallel implementation of the same algorithm using different initial seeds, it is necessary to use a random number generator that has a period greater than.
All amplicons were sequenced in parallel.
In addition, CBaSeTraM can use MPI [17] to search multiple sequences in parallel.
