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With each round of Neutral SELEX, sequences became less stable and changed in nucleotide content, but no sequences were enriched.
Among 30 mouse MsrB1 ESTs, Form 1 sequences were prevalent in samples from C57BL/6 mice, whereas Form 2 sequences were enriched in FVB mice.
Consistent with this observation, the TAR-deduced peptide sequences were enriched for GC-rich codons, such as Pro and Arg (Figure S6).
These results suggest that the functional SH3 RNN 28 sequences were enriched earlier than the functional SH3 NNN 28 sequences, and it presumably caused recombination between the formerly enriched sequences in the SH3 RNN 28 library during PCR.
As shown in Figure 2C and 2D, telomere sequences were enriched in IgG pull-down samples from TAP-tagged zfTPP1 expressing cells, indicating that zfTPP1 can associate with telomere DNA in zebrafish cells.
We observed that HIV LTR-specific sequences were enriched in immunoprecipitates from Tat-expressing cells, indicating that histone H3 phosphorylation at the HIV promoter was increased in the presence of Tat.
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Recent findings indicate that repetitive sequences are enriched in chromosome-associated non-coding RNAs, and repeat-rich RNA shows unusual properties, including localization and stability, with similarities to XIST RNA.
ORC-associated sequences are enriched for the histone variant, H3.3, often at transcription start sites, and depleted for bulk nucleosomes.
Recent in silico prediction of cis-sequences over-represented in Fe deficiency-induced gene promoters revealed that the IDEF1-, IDEF2-, and OsIRO2-binding sequences are enriched within the 500-bp promoter regions of Fe deficiency-induced genes (Kakei et al. [2013]; Ogo et al. [2014]).
The NR patent sequences are enriched with biological annotation and additional data from patent documents.
Fusobacterium nucleatum sequences are enriched in participants with CRC, while those from Bacteroidetes and Firmicutes phyla are depleted.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com