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Exact(27)
cis-elements within motif sequences were counted for all putative regulatory sequences in the training set, and those with multiple copies were summarized (Table 2).
Clonally related sequences were counted only once.
All identical sequences were counted and combined into one record.
The percentage of miRNAs was 65.12% when the redundant sequences were counted.
After trimming the ligated adaptor sequences, identical sequences were counted as their expression abundances.
Positions with gaps for both sequences were counted as matched, while positions with a gap for only one sequence were counted as mismatched.
Similar(33)
In enumerative methods, numbers of all the small sequences in a group of upstream sequences are counted and compared with those in a background group.
To compare methods, the number of tracking failures incurred by each of the methods on the same test sequences is counted.
These NCBI RefSeq sequences are counted as 'complete' in the 'type of sequences' column.
Here, the number of synonymous (S) and non-synonymous (N) sites in the sequences are counted.
The miRDeep2 mapper module converts fastq reads to fasta where unique sequences are counted for alignment.
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