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The multiple alignments of the sequences were computed by the computer program L-INS-i in MAFFT (Katoh et al. 2005).
To ensure that the computational tasks were comparable, all sequences were computed at their melting temperatures Tm, rather than one temperature for all, such that all sequences had the same fractions of helical regions and bubbles.
The theoretical parameters of the deduced protein sequences were computed using the ExPASy Proteomics Server (http://cn.expasy.org/tools/pi_tool.html).html
From this starting point, alignments representing mature and "star" sequences were computed into hairpins, similar to steps within the miRDeep algorithm.
Beat-to-beat endocardial and epicardial ventricular activation sequences were computed during native rhythm as well as during ventricular pacing using a bidomain theory-based heart model to solve the related inverse problem.
Consensus sequences were computed with CodonCode Aligner 3.0.1.
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Channel allocation sequences are computed in such a way that intrapath interference is eliminated.
The both methods conduct data normalization before the DTW distance between two normalized time-series sequences is computed.
The overall acceptance rate of, representing the similarity of two sequences, was computed from 100 runs of each homogeneity test.
The optical flow obtained from these video sequences is computed to obtain an estimate of the apparent motion present in the scene.
Using MATLAB, the iterative sequences are computed and are depicted in Figure 1 and Figure 2. Figure 1 The non-decreasing sequence (pmb{{u_{n}(t)} _{n=0}^{4}}) in the interval (pmb{[0,1]}).
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