Sentence examples for sequences were accessed from inspiring English sources

For DNA methylation analysis, quality of the sequences were accessed using the Sequence Scanner 2 software (Applied Biosystems®), DNA methylation levels in CG, CHG and CHH cytosine types were assessed using the CyMATE web tool [44], and statistical analyses were performed with R language and statistical environment [45] using in-house scripts.

Genetic sequences were accessed from Ensembl[50] (latest release 58 – May 2010) and transcripts were assessed for the presence of the described cMS.

Drosophila melanogaster gene and protein sequences were accessed in FlyBase [ 31].

Nucleotide and amino acid sequences were accessed from GenBank (http://www.ncbi.nlm.nih.gov/).nih.gov/

Arabidopsis and rice sequences were accessed through the CAZy database [ 1, 2].

The Drosophila melanogaster gene and protein sequences were accessed in FlyBase [ 48].

The sequences are accessed from the global memory by processors and the score is calculated with the help of BLOSUM62 matrix, which is stored in the shared memory.

Since de novo sequence assembly is performed mostly on non-model organisms and possible function of the assembled sequences is accessed with respect to a closely related organism, we used translated BLAST search [ 19] to simulate its usage.

For instances wherein homology between paralogs extended beyond 2 kb of the flanking region(s), an additional 1 kb of flanking sequences was accessed from the database and subsequently aligned.

Primers were designed using primer3 software available free on http://fokker.wi.mit.edu/primer3/input.htm and nucleic acid sequence was accessed from http://www.ncbi.nlm.nih.gov/entrez/viewer.fci val=Reference ID Table.

The UMD3.1 genome assembly sequence was accessed through the ensembl website (http://www.ensembl.org).org