From a set of 32,896 sequences, we found only 145 sequences that were foldable.
For class C sequences, we found that BD-BR increases by 4.17% to 5.83% and BD-PSNR decreases by 0.17 to 0.23 dB.
On comparing different sequences, we found that both the circular poly T sequence on the loop region and the stem sequence play important roles in this fluorescence enhancement effect.
By examining individual BAC end sequences, we found evidence for 11 unique integrations of MAGGY or MGL into Pot2 but no evidence for the reciprocal integration of Pot2 into another TE.
Using this method to edit the GAL1 and GAL80 promoter sequences, we found that the relative positioning of promoter elements was critically important for setting promoter activity levels in single cells.
Upon scanning the protein sequences, we found putative evolutionary conserved β-TRCP degron motifs in ZNRF3 and its homolog protein RNF43 in the intracellular domain (Figs. 4A and S3A).
For the shared CDR3 sequences, we found that most of them are dominant clonotypes, likely public ones to ward off common pathogens like influenza virus, Epstein-Barr virus, and Cytomegalovirus.
After we aligned human and chimpanzee sequences, we found 40 non-synonymous mutations and 21 synonymous mutations.
Using all the available full length sequences, we found 13 conserved sites that had not been previously reported (Table 1).
Within these 501 sequences we found sequences with high similarity to 16 Phytophthora CRNs, 17 RXLRs, and 1 CBEL.
Among the 4277 sequences, we found 2728 In100-elements (in 2012 genes) that have both upstream and downstream exons annotated with ESTs.
