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Genomic sequences, transcript expression levels, and data from other poeciliids have also not been reported to date.

Genome sequences, transcript sequences, genome statistics, and annotation are available for download via Genbank (see Table 1 for accession numbers).

By transfecting RA T cells with DNA-PKcs specific-interfering sequences, transcript levels for the gene were reduced by about 70% (Fig 5A).

Currently, ShrimpGPAT holds full-length cDNA sequences, individual EST sequences, transcript contigs and protein sequences for 14 decapod species (>500,000 combined records) together with putative functional annotations.

ESTs have been useful for intra- and intergenomic comparisons, gene discovery, generation of single nucleotide polymorphisms (SNPs), cloning of genes from MStag peptide sequences, transcript pattern characterization, identifying splice variants, erroneous annotations in the genome database and incomplete prediction of gene structure [ 4, 5].

Representation of the respective transcriptome is variable among the set of 13 Solanaceae Transcript Assemblies used in this study [ 49]; sequences (Transcript Assemblies and singletons) ranged from 716 in the S. lycopersicum × S. pimpinellifolium Transcript Assembly to 81,072 sequences in the S. tuberosum (potato) Transcript Assembly (Additional Data File 3).

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The Arabidopsis Small RNA Project Database, abbreviated as ASRP, intends for Arabidopsis thaliana small RNA mature sequences, transcripts and locus [ 15].

After removal of repeats from the spliced sequences, transcripts were obtained of the expected length and size.

To evaluate the accuracy of the assembled sequences (transcripts), all the usable sequencing reads were aligned onto the transcripts using Bowtie2.

By removing incomplete gene sequences, transcripts of the same genes, and redundant sequences, we identified nineteen non-redundant CDPK genes in the grape genome (Table  1).

However, recent advances in DNA sequencing, transcript profiling, protein identification and protein quantification are leading to a flood of genomic and proteomic data that is, or potentially could be, linked to disease data.

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