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There are 949 protein sequences samples in PIR1 and 534 protein sequences samples in PIR2.
The dataset covers 21 different skin locations represented by 16S rRNA sequences samples.
Next, we report a heatmap with the fold change of the gene expression for each pair of sequences samples.
Our results demonstrated that draft genomic sequences samples representing ~1× of the genome can be used to measure variation at the whole-genome level in this species.
As we amplified only exonic sequences, samples were tested with and without reverse transcriptase in order to rule out genomic DNA contamination.
When ambiguous base calls were present in sequences, samples were cloned if the rough sequence gave a significant blastx hit for Viridiplantae.
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Our dataset comprised 137 YFV sequences sampled from nine South American and Caribbean countries between 1954 and 2017, including the two recently described YFV sequences from the Brazilian 2017 outbreak16.
Phylogenetic analyses of partial large subunit (LSU) rDNA sequences sampled from 166 isolates revealed nine well-supported siphonocladalean clades.
In most patients we detected a significant divergence between sequences sampled before and after treatment.
The neuraminidase sequences sampled for this study covered the entire monomer, across 1419 sites, indels included.
Here, we sequenced partial NS5b gene sequences sampled from blood samples collected from 591 patients in São Paulo state, Brazil.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com