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Comparison of these sequences indicated that the cells expressing them were clonally related but that they had undergone considerable mutation.
Phylogenetic studies based on partial RNA polymerase gene sequences indicated that the Venezuelan isolates were most closely related (75 95% identity) to the sapovirus Cowden reference strain.
The ab initio molecular modelling of such sequences indicated that the structure does not affect the predictions, as both sets present similar structures.
Phylogenetic analysis of 18S rRNA sequences indicated that the novel Eimeria sp. shared the highest genetic similarity to Eimeria antrozoi and Eimeria rioarribaensis from vespertilionid bats from North America (⩾98.9%).
Bioinformatics analysis of the partial nucleotide and deduced amino acid sequences indicated that the rRmLTI closely resembles BmTI-6, which is a three-headed Kunitz protein present in cattle tick ovary and fat tissue.
Analysis of the 16S rDNA sequences indicated that the four strains were Donghicola sp. CT5, Bacillus sp. CT6, Alcaligenes sp. CT10, and Pseudomonas sp. ZS1 (Fig. 1c).
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Finally, several TCs – Cl000209 1 (61 ESTs) Cl000582 1 (18 ESTs) Cl001827:1 (5 ESTs) and Cl000731(2 ESTs) – show similarity to potyviral sequences, indicating that the sequenced library likely derives from virus-infected tissue.
Burger, T. D., Shao, R. & Barker, S. C. Phylogenetic analysis of mitochondrial genome sequences indicates that the cattle tick, Rhipicephalus (Boophilus) microplus, contains a cryptic species.
They all have predicted N-terminal signal sequences, indicating that the N-terminus is extracellular.
These EST sequences and reported complete coding sequences indicate that the amino acid sequences of chicken chemokine receptors are mostly encoded in one exon.
Analysis of the activity of the transgenes whose transcription is initiated by Gal4 > UAS sequences indicates that the presence of the SOPE in the UTR dampens activity.
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