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Information is carried by the starting time difference between the two sequences in each symbol.
Figure 5 displays a map of the putative breakpoints for all recombinant sequences in each patient.
Taxonomy information was prepared in XML format for the sequences in each set.
Thus, the number of sequences in each alignment ranges from 4 to 807.
Logos of the sequences in each group were created with Weblogo v.2.8.2 (http://weblogo.berkeley.edu/).edu/
Our experiment also revealed the presence of contaminating sequences in each sample set.
We additionally measured the amount of positive selection among sequences in each cluster.
The AUG 3' flanking sequences in each group were aligned and analyzed by the Weblogo program.
The number of sequences in each of the extracted datasets is included in Table 1.
Because of the varying number of sequences in each group manual weighting was performed.
What about RNA sequences in each group?
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