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For this restriction, a sequence was randomly selected from multiple sequences at an intron in each species.
We mapped domains to Uniprot sequences using HMM libraries from CATH and the software HMMER [41], assigning domains to sequences at an e-value of 0.001.
The recent availability of new generation sequencing technologies [1], [2] has provided unprecedented sequencing capacity, enabling the acquisition of genome-scale sequences at an extraordinary fast rate.
As a result, it trims the various sequences at an approximately equal length, reducing the length of the longer sequences; this can therefore be problematic when taxonomy is assigned using a minimal percent of similarity with the reference sequences.
The overall error rate in these sequences, at an average of 2.5 errors per kb, is comparable to the average rate at which nucleotide differences occur between individuals of a typical mammalian species.
While not well resolved in this present study due to the lack of reference data and genomic sequences at an appropriate depth, terminal biosynthetic enzymes may be especially prone to non-vertical modes of evolution ([28]; consider also cyanobacterial monocyclic xanthophyll biosynthesis), presumably resulting from the minor adaptive significance of these changes.
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This year, it has produced more than 3,000 sequences at a cost of about $5,000 each.
The presented architecture addresses the cognitive ability to set up representations from sequences at a mesoscopic level.
CD-HIT version 4.6.163 was used to remove redundant sequences at a cutoff of 90% identity with the command '-c 0.9 -T 16 -M 50000'.
He shot the film in what he referred to as "globs," where he would shoot entire sequences at a time.
Nucleotide diversities represent the average number of nucleotide differences between two sequences at a given site.
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