Sentence examples for sequences as reflected from inspiring English sources

Thus, it is likely that the sampling of rDNA sequences, as reflected by BES survey sequencing, is reflective of a true rDNA content difference in the nuclear genomes of tomato and potato.

One of them refers to the fact that in coding sequences there is a 3-base periodicity in the nucleotide sequences as reflected by all possible correlations of single bases, duplets and triplets [49], [42], [61], the FDD of triplets [62], the autocorrelation function [63], [59] or by the mutual information function of single bases [64].

Members of the PSMR subclass appear to have very different selective constraints placed upon their sequences as reflected by the variable mean dS/dN values for each PSMR homologue in comparison to either SMP or SUG subclasses (Table 3 and Additional file 2).

Sequence-specific learning in the ASRT task is based on unconscious detection of the conditional probabilities within the stimulus sequence as reflected in the high- and low-frequency triplets [39].

Besides, the interdomain region, 17-residue insert and C-terminal tail were all found to evolve in vertebrates under more relaxed selective constraints than the rest of the sequence, as reflected by significantly higher ω values (Mann-Whitney P = 0.03, P = 0.02, P = 0.007, respectively).

Some of this difficulty stems from limited detection of highly divergent sequences by sequence alignment, as reflected by the partial connectivity of most protein families.

Availability: ClanTox is available at http://www.clantox.cs.huji.ac.il Contact: [email protected] In recent years, with the expansion of genomics data and the development of 'next-generation sequencing' we have witnessed unprecedented growth in sequence information as reflected in the ∼20 million UniRef sequences.

However, additional Illumina sequencing was ineffective in providing a better sequence assembly, as reflected in the plateau N50 values after 70 X sequence coverage.

We next evaluated differences in the strength of UGT1A6 and UGT1A1 amino acid sequence fixation (as reflected by the dN/dS ratio) between the various lineages of Carnivora.

Although PINARRAY3 and the RNA-Seq reference transcriptomes represent approximately 90%% of the protein-coding genes of maritime pine and both were selected from the same database (SustainPineDB), the methods for contig selection were different resulting in different sequence pools as reflected in Fig.  1.

Although data from the preliminary STS screening indicated that all the 19 deletions were gr/gr deletions (even though one case could also correspond to a b2/b3 deletion profile), the analysis of the amplicon-specific markers revealed high sequence variability, as reflected in 14 different marker profiles with varying gene content [see Additional file 1].