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The dif sequences are predicted in a total of 97 organisms, with a prediction rate of 97.00%.
The Golgi complex is decorated with so-called Golgin proteins that share a common feature: a large proportion of their amino acid sequences are predicted to form coiled-coil structures.
13,732 coding peptide sequences are predicted with TransDecoder.
Only 93 sequences are predicted to actually contain a T3SS signal.
None of these sequences are predicted to have any other functional domains.
BLi04119 does not show any sequence similarity to known proteins, however, six transmembrane sequences are predicted for this protein.
Signal sequences are predicted for most of the 157 VirB5 and VirB5-like proteins from diverse bacteria available on GenBank (data not shown).
The presence of predicted protein domains in the translated amino acid sequence suggest that the corresponding genes are novel because the cDNA sequences are predicted to be protein coding and not UTR sequence, which otherwise might have explained the missing similarity to other protein coding sequences.
Both protein sequences are predicted to possess five transmembrane helices.
Similarly, two bird sequences are predicted, which share characteristics of the TG5 and TG7 families.
These Alu sequences are predicted to promote the occurrence of large deletions (Table 1).
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CEO of Professional Science Editing for Scientists @ prosciediting.com