Sentence examples for sequences and downstream from inspiring English sources

Analysis of the nucleotide sequences underlying the NAIPSg and NAIPJb TSS revealed the incidence of several putative pol II regulatory motifs, including: TATA-like boxes, initiator sequences, and downstream promoter elements (Figure S4) [39].

This revealed that the transposon sequences and downstream sequences for 4/5 were identical to the two isolates from P7.

These data are different from a recent analysis of Arc genomic methylation in which both promoter sequences and downstream exonic regions demonstrated differential methylation in hippocampal subregions of aged rats.

Fastq data files were split using index sequences and downstream methylation analysis was performed using Bismark (Krueger & Andrews 2011) and summary plots and test statistics were generated using the R statistical software (R-Core-Team 2014).

Genome mapping also provides valuable haplotype information on complex regions, such as MHC, killer cell Immunoglobulin-like receptor (KIR), T cell receptor alpha/beta (TRA/TRB) and immunoglobulin light/heavy locus (IGH/IGL), which can help determine these hyper-variable regions' sequences and downstream functional analyses.

For each motif, after we counted the number of occurrences in the differentially spliced exons and the control exons, we calculated p-value for motif enrichment via Fisher's exact test (right-sided) and used Benjamini-Hochberg FDR correction to adjust for multiple testing for exons, upstream intronic sequences, and downstream intronic sequences separately.

Here the non-coding sequence includes the upstream sequences, introns and downstream sequences of M1.

Each RIFIN gene in the three genomes was considered as an arrangement of three modules: 5' upstream sequences (1 Kb; 5ups), coding sequences (cds) and 3' downstream sequences (1 Kb; 3dwn).

The lipase gene was cloned upstream of the phage g3p encoding sequence and downstream of a modified g3p signal sequence.

L.O., with help from H.V., T.W. and M.W., completed the laboratory work under supervision of S.H., J.E. and C.C. S.G. and L.O. completed the sequencing and downstream analysis of the sequences respectively.

The most recent developments in the area of deep DNA sequencing and downstream quantitative and functional analysis are rapidly adding a new dimension to understanding biochemical pathways and metabolic interdependencies.