The phrase "sequence wise" is correct and usable in written English, and typically means "in the order of something (i.e.
chronological, numerical, etc.)". For example: "These steps must be completed sequence wise in order to complete the process" (meaning: the steps must be done in the order they are listed).
Recombinant IAVs were rescued by eight plasmid transfection and segment seven, verified by sequencing (Wise et al., 2012).
The fully artificial RNA system chosen for the exploration corresponds sequence-wise to the reconstructed initial triplet repeats, presumably corresponding to the earliest protein-coding molecules.
Of the kinase outliers detected in our analysis, Kuhn et al. also discovered that the kinases LCK, FGFR1, AKT2, DAPK1 and TGFR1 have unexpected binding site similarities (and hence, unexpected predicted SAR similarities) with sequence-wise distant kinases, which is in accordance with our analysis [32].
This suggests that MsDps2 is not the exact duplicate of MsDps1, sequence-wise, and by corollary, in their functional roles too.
The resulting alignment was read sequence-wise.
The web server also provides the BLAST output, which shows that FZD1 is indeed sequence-wise most similar to FBpp0075485.
All the four major repeat elements were AT rich but sequence-wise, were different from one another (Additional File 2).
It is striking that, with few exceptions, all GRX domains from proteins containing a specific type of domain combination are, sequence-wise, closely related amongst themselves.
So using NATALIEQ, we find that FZD1 may functionally be more related to FBpp0077788 than its sequence-wise most similar counterpart FBpp0075485.
We propose in this paper a methodology which consists in collecting all possible different TISs, as well as genes which are present sequence-wise in a strain but whose annotation is missing.
