Sentence examples for sequence window from inspiring English sources

This indicates a very narrow sequence window for TF-specific antibodies.

During DynaMine optimisation it was found that using a wider sequence window as an input for the predictor increases the correlation between DynaMine predictions and reference experimental data32.

Each sequence window is associated with a set of similar sequences from the genome (WPHs).

Strikingly, for both organisms the average distance of appearance of slow-translating codons is +/−9 codons (Figure S1), i.e., a cluster spans a sequence window of 19 codons.

We calculated analogous p-values when comparing the overlap of common word signals in a WPH set with the predicted TFBSs across the seed sequence window.

During the training process, each sequence window was considered as an individual training example and given a score, i.e. the ANN or SVM output.

Primer selection was guided by uniqueness of the oligonucleotide sequence across the human genome, as well as the CpG distribution within the 1 Kb sequence window.

PCR primers were designed to amplify approximately 400 600 bp amplicons within a 1 Kb sequence window spanning the sequence represented by the associated microarray feature.

The ratio of the number of uniquely aligned reads in paired tumor and normal samples for any given genomic sequence window is an estimate of the copy number change in the window.

The matrix-specific SS value of each DNA sequence window was calculated by adding the PWM-determined scores corresponding to each of the respective bases within the window as described previously [31].

An RKPT-enriched region is defined by the presence of at least 3 carbonylatable sites within a 4 amino acid sequence window, resulting from an optimal combination of specificity and sensitivity (supplementary Table S1).