Sentence examples for sequence threshold from inspiring English sources

Hebert et al. (2004) proposed a standard sequence threshold: ten times of the mean intraspecific variation for the group.

As the minimum interspecific divergence was 10.7% in this study based on the COI gene, this is enough to exceed a standard sequence threshold in G. salicornia.

Utilizing this barcoding gap, a standard sequence threshold was proposed to define species boundaries of around 10 times the mean intraspecific variation for the group under study [9].

Meanwhile, the ratio of the cluster coefficient between 5' and 3' halves were constantly 1∶2.5 1∶4 showing that characteristics of the 2 tRNA domains significantly differ at all level of sequence threshold (75% 88%).

Hebert et al. [4] suggested that a sequence threshold of ten times the average intraspecific variation could be used to identify those cases where a current species might represent more than one taxon.

Combined graphs were generated for each analysis with a level 3 cut-off and a minimum sequence threshold of 100 per category.

Corresponding sites falling below this five-sequence threshold were treated as unpaired.

Of the variability within WES target capture regions, 2-3 % arose within protein-coding regions at ≥20x depth of sequencing threshold [ 26].

Finally, low complexity sequences (threshold entropy value of 60) and poly A/T 5′ tail (minimum of 5 A/T) trimming was performed using PrinSeq.

We showed that current accepted exome-sequencing threshold of ≥ 20x is unsaturated at average 50x-100x WES target coverage, since interpretation of the targeted bases varied significantly among technical replicates at a ≥ 20x threshold and not significantly at ≥ 1x threshold.

Considering a sequencing threshold of 1,000 reads per amplicon, the capacity of the number of amplicons and samples that can be analyzed in one run could be increased by two hundred-fold.