Sentence examples for sequence removal from inspiring English sources

The signature sequence removal will be completed by removing the first element of k ¯ select so that the vector length is reduced to Kopt−1, and by removing the first columns of Q, Q1, and Q2 so that the received signature sequence matrix dimension becomes N R (N+L−1)×(Kopt−1).

Although this quality filtering removed a large amount of sequence, removal of low quality bases is likely to result in a more accurate assembly [ 37].

Groups from which sequences were removed due to excessive divergence are realigned after sequence removal with the same parameters before proceeding with analysis.

Vector sequence removal was performed using Vector NTI software (Invitrogen, CA).

For example, upon mini-F transposition into ORF50, 15 of 23 tested colonies were positive by PCR screening for the mini-F sequence removal from the unique US AvrII site.

XB conducted vector sequence removal, assembly and analysis of EST sequences and prepared the manuscript.

Length and 5′-sequence removal thresholds were determined by analyzing nucleotide frequency plots generated using FastQC v0.10.0 (http://www.bioinformatics.babraham.ac.uk/projects/fastqc/, last accessed December 18 , 2014.

To maximize the sensitivity of the paralog and paralog-related sequences removal step, we performed sequence alignment and comparison at both the protein and nucleotide levels.

After alignment of the 17 mitogenomes, additional QC measures were applied to variable sites, including verification of low coverage/quality sequence with Sanger sequencing, removal of duplicate Illumina reads and testing for strand bias.

After trimming (i.e., vector, ribosomal, short, low quality and E. coli contaminant sequences removal), 135,876 C. arabica ESTs were assembled into 17,443 contigs and 17,710 singlets (35,113 clusters; Figure 1), and the C. canephora ESTs were assembled into 8,275 contigs and 9,732 singlets (18,007 clusters; Figure 1).

Introns were either analyzed as complete sequences or as partial sequences after removal of putative splice control sequences (i.e., excluding the 6 bp and 16 bp at the 5' and 3' ends of the intron, respectively).