Sentence examples for sequence query from inspiring English sources

After identifying the candidate loci, 400 bp of flanking sequence on either side of the SNP were retrieved using the 'Sequence Query' feature of the MamuSNP web interface (http://mamusnp.ucdavis.edu); these sequences were used to generate oligonucleotide primers.

Protein identification was performed with the Phenyx (Genebio) sequence query search program using the leech EST (http://genomes.ucsd.edu/leechmaster/transcriptome-paper/) and genomic (http://genome.jgi-psf.org/Helro1/Helro1.home.html) databases filtered for the taxonomy "Hirudo medicinalis and Helobdella robusta".

However, using AvrB as a sequence query with the sensitive profile-based homology detection method COMPASS [22], [23] identified an insignificant hit (E-value 5) to the fic domain structure (3cuc).

These singletons were analyzed as sequence query in separated phylogenies.

PSI-BLAST results reported for initial detection of representative hits using a sequence query corresponding to the mid domain structure.

The recombination analysis takes a single sequence query, accompanied with three or more references to give adequate estimations.

Specifying event sequence queries is challenging even for skilled computer professionals familiar with SQL.

While structure prediction Web servers are a notable option, they often restrict the number of sequence queries and/or provide a limited set of prediction methodologies.

Sequence queries are BLAST similarity based.

The implemented in BiologicalNetworks approach to the sequence querying is discussed in detail elsewhere [ 42].

The S. cerevisiae Mat1-1-1 and Mat1-2-1 proteins were used as sequence queries.