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Incidence of APRs within TcIERs is not special to biotherapeutics, self-TcIEs from human proteins, involved in various diseases, also contain predicted APRs and experimentally proven amyloid-fibril-forming peptide sequence portions.
In addition, the C-terminal sequence portions of the collected T3SS effectors were included in the negative training set.
The mitochondrial and the ITS data sets contain sequence portions that are highly variable.
Vector and PCR primer sequence portions were removed from cDNA sequences using Geneious software (Biomatters Ltd., Auckland, New Zealand).
Investigating noncoding, neutrally evolving sequence portions does not overcome the problem of selection because they might be influenced by hitchhiking effects of linked loci [ 17].
Owing to difficulties in amplifying the whole cytb marker, internal primers were designed, leading sometimes to the submission of several sequence portions.
Similar(45)
On the other hand the same approach did not allow amplification of the sequence portion of NRT2 genes in leaves.
Mince only compresses the sequence portion of FASTQ files, requires all reads to have the same length, and ignores the quality values.
These markers were also used for proper description of the fusion and conservation alleles (i.e. alleles involving a portion e.g. a whole exon of a CYP2D6 allele, swapped with the similar sequence portion of a CYP2D7 allele).
The identified H-CDR3 OCB peptide mapped to a CSF sublineage; in the PB and remaining CSF sublineage, this sequence portion displayed a single amino acid replacement from V to A at amino acid position 6 of the described peptide.
In this example, the protein Rv2253 from the Sanger dataset had the N-terminal predicted to start in position E30, just after the sequence portion AAA, confirming an AXA motif (marked with a short underline).
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