Sentence examples for sequence patterns of from inspiring English sources

In this stage, valleys inherited the sequence patterns of the earlier incised valleys, and their main mechanism of sedimentary dynamics was incision.

Sequence patterns of DYS388, DYS439 and DYSA7.2 loci were converted to number of repeats following the recommendations of Gusmão et al. [33].

The results of this study revealed that the nucleotide sequence patterns of nucleosome positioned in vivo are strikingly similar to those assembled in vitro from purified components.

Recent application of this model class to modeling real biological genetic circuits show that they can predict sequence patterns of protein and gene activity with much less input (e.g. parameters) to the model as the classical differential equations approach.

For example, a class of discrete dynamical systems with binary states, mathematically similar to models used in artificial neural networks, has recently proven to predict specific sequence patterns of protein and gene activity as observed in living cells [12], [13].

Recent sequence-based bioinformatics approaches to finding new effector proteins utilize consensus sequence patterns of the N-terminal secretion signals [9], similarity-based comparison to known effectors [13], the genomic organization of the effectors by identifying genes in vicinity to chaperone homologues [14], and amino acid composition rules [15].

We therefore propose to add this first aspartate residue in the consensus sequence pattern of CDP-OH phosphotransferases, as previously suggested25.

The last three Asp are part of the conserved sequence pattern of CDP-alcohol phosphotransferase family, DG x 2AR x 7,8G x 3D x 3D, as defined in Prosite17, but all four aspartate residues are highlighted in the HMM logo of this family (Fig. 4b).

In the first stage, the binding sites are clustered based on a sequence pattern of their contact residues.

The preferred sequence pattern of the tight turn connecting the α-helix and the subsequent even-numbered β-strand (Figure 5), GAD, has been reported previously [1].

In brief, the binary code strategy posits that stably folded proteins can be encoded by specifying the sequence pattern of polar and nonpolar residues (the binary pattern) to coincide with the exposed and buried parts of a structure, respectively.