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As indicated in Supplementary Table S1, 26 different sequence organizations (SOs) were identified in this region.
The tissue- and spermatozoa-specific sequence organizations in transcripts tagged with GACA/GATA repeats substantiated this hypothesis.
All final consensuses were used as bait, using reads from the genome project as prey to confirm new sequence organizations.
Sequence organizations of the five orthologous regions are illustrated in Figure 2 and detailed in Additional file 1, Table S1.
Contrasting with the conservation of these two domains, we observed different sequence organizations of the DnaJ-Fer proteins in the Viridiplantae and in the Thaumarchaeota.
In HSA lineage, one of the two 4qA-like sequence organizations underwent the deletion of a region including one D4Z4, the pLAM and the Beta satellite cluster, originating the 4qB allele.
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Unigene resources representing the transcriptome of an organism provide opportunities to understand the sequence organization in the genic regions of complex polylploids and allow design of sequence based robust markers for various genotyping applications.
Thus transformation provides an in vivo assay for the functional role of DNA sequence organization about specific genes.
It is still debated in the scientific community whether there are general properties of sequence organization that determine these functions, which would suggest a high-order code.
Then, the impact of the fluid velocity, the column length, the refresh time, the sequence organization and the number of columns on the yield, productivity and fluid requirement is investigated.
Recently, on the basis of the unusual DNA sequence organization of the DRD4 7R 48-bp tandem repeat (VNTR), we proposed that the 7R allele originated as a rare mutational event that increased to high frequency by positive selection.
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