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The algorithm converts the input diagrams into a graph representation called as Sequence Graph (SG) and then merges them into a single SG.
Such a sequence graph always satisfies detailed balance (Methods).
The nucleotide sequence is thus converted into a sequence graph.
The sequence graph can be smoothened by a shifting window technique.
Most of the DiProGB tools can be applied to both, the primary nucleotide sequence and the sequence graph.
Overlapping features are visualized by stacked bars in the so-called feature graph below the sequence graph (Fig. 1).
Similar(45)
Two elementary mutation operators, insertion and omission, are exemplarily applied to a hierarchy of graph-based models of increasing expressive power including directed graphs, event sequence graphs, finite-state machines and statecharts.
According to reading the sequence graphs, the genotype was determined.
Results were similar between the two sets of frequency sequence graphs.
The sequence graphs were analysed manually and with Mutation Surveyor software (SoftGenetics, State College, PA, USA).
Furthermore, we constructed frequency sequence graphs (logos) for 4024 siRNA sequences of 12 29 nt in length with an mRNA match.
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