Sentence examples for sequence directories from inspiring English sources

The sequence directories are organized into Polyphred structure and contain additional files (such as read quality).

A sequence alignment analysis was carried out to compare with current GenBank and V-BASE sequence directories (MRC Centre for Protein Engineering, Cambridge, UK) (Cook and Tomlinson, 1995) using MacVector 4.0 sequence analysis software (International Biotechnologies Inc., New Haven, CT, USA).

This script creates a separate map for every sequence in the comparison_genomes directory, depicting the results of BLAST comparisons with all the other sequences in the directory.

The dataset consists of separate directories for sequences from each of the 3,000 rice genomes.

Before running Sherman, human chromosome divided into 500 bps sequences and saved in separate directories.

The user selects a FASTA-format sequence file containing multiple sequences, a directory of FASTA files or a NEXUS format file as input.

The sequence data were imported in the directory files of the software.

Raw sequence data is stored under specifically named directories described in the metadata; the Study table is the master table in this case.

The "Remote Directory" input allows the user to specify an execution directory for all nodes in the sequence.

GenomeScanner is designed to read all DNA sequence files (in FASTA format) in a directory, create an array of sequence contig filenames, then process each sequence file base-by-base to identify sequences that match a particular profile.

The second and even simpler approach to using CCT is to run the build_blast_atlas.sh script (Additional file 2), which accepts a GenBank file as input and creates several graphical maps comparing the input sequence to all sequences placed in the comparison_genomes directory.