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The results on motif-related inducibility by salicylic acid and abscisic acid, as seen in a synthetic sequence background were validated by experiments on the expression of the native promoter of a protein phosphatase 2C-like gene of Arabidopsis in tobacco leaves.
Heteroplasmic-like patterns frequently show up in the electropherograms as a result of sequence background noise.
This analysis revealed a significant increase (p = 3×10−14) in sequence homology around the mtDNA deletion breakpoints above that of the mitochondrial genomic sequence background.
It is more likely, that sequential or combinatorial substitutions at the sequence background of the marsupial V2R orthologs lead to increased basal receptor function.
Genome-wide intergenic sequences filtered for LTR were used as sequence background.
CisModule is based on a Bayesian hierarchical mixture model to infer motifs by their sequence background.
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The substantial oligonucleotide modifications that allowed for successful detection of mutations within diverse sequence backgrounds, combined with extensive validation and improved sensitivity, make these assays feasible for large-scale resistance testing.
More fundamentally, the evolution of hypervariable core sequences within very highly conserved DNA sequence backgrounds has not been examined.
We collected the background sequences for CREB, SRF, TBP, MEF2 and MYOD datasets from public databases (e.g., http://www.ncbi.nlm.nih.gov and http://www.ebi.ac.uk) as the respective sequence backgrounds.
This gene-by-gene analysis reveals a wide range of genes related to both virulence behaviour and the strain differences that have been relatively recently acquired from other sequence backgrounds.
The mean intensities of each chip, the mean intensities for negative or positive controls and the mean intensities obtained for random sequences (background level) were determined.
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