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Every sequence in the (seed or full) alignment of a given protein family is given a chance to be the reference sequence and coverage analysis is performed using individual FASSM runs.
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The sequence identity and coverage of the template and its PDB code.
Very few strong-motion stations were operational during the sequence, and spatial coverage of recorded ground motion is very small.
Detailed information for each identified protein, including protein IDs, number of peptides used for identification and their sequence and % coverage, normalised fold changes and log2 ratios are shown in Supplementary Table S1.
Vast sequencing depth and coverage also enables generation of high-resolution and phased genotypes.
The coefficient of proportionality depends on e.g. the sequencing method and coverage depth.
The average sequencing depth and coverage was calculated using the results of alignment.
This includes data from both low coverage whole-genome sequencing and high coverage exome sequencing.
By sequencing, a mean coverage of 82 % was reached, 10× coverage was 97.5 % for target sequences and 30× coverage was 87.1 % on target (Additional file 1: Table S1).
All further information such as accession numbers, peptide sequences and sequence coverage refer to the top-ranked spot.
The number of reads obtained during the sequencing and the coverage this resulted in.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com