Sentence examples for separate alignment from inspiring English sources

The separate alignment option aligns all sequences against different references separately in a run.

US-50 overlaps US-89 between I-70 and Salina, following I-70 east and a separate alignment northwest from the area; the short Interstate 70 Business also uses this roadway as a business spur from I-70 to the city.

Even though they sit alongside each other, it may not be reasonable to count them as two separate alignment events.

It is quite possible that a separate alignment method optimized for modeling may further improve the accuracy of predicted model.

Since this approach is generally considered to be conceptually superior to the generally used two phase methods, which separate alignment estimation and tree topology inference [15], [16], we considered the alignments and topologies derived from these searches to be the "true" tree.

A separate alignment was then edited manually for each allele.

To accomplish this, separate alignments are aligned together while preserving the columns in the individual alignments.

Let us use the Ω1|3 notation for the model defined by M1 optimally aligned versus M 3. We start from separate alignments of M1 and M 2 with M 3 as a reference.

The whole-genome nucleotide level alignment was assembled using T-Coffee [ 63] from 3 separate alignments: 5'-UTR and 3'-UTR aligned with MUSCLE (default parameters), and the amino acid level multiple alignment of the ORFs projected to the nucleotide level using the TRANALIGN programme from the EMBOSS package with default parameters.

The SR3 vs JN177 comparison revealed an insertion to deletion ratio of ~1 irrespective of indel length (Fig.  1a, b).> -wrap-foot> "Small" indels were defined as those lying within an aligned sequence, while "large" indels split matched sequence into two separate alignments.

Aligned nucleic acid sequences were imported into ARB and merged as separate alignments linked to their corresponding nifH records.