Sentence examples for sensitive to read from inspiring English sources
We evaluated this by using BLAT, as this mapping tool was found to be sensitive to read length and genome complexity and should thus show the most pronounced effect.
As with CAST simulated reads, polymorphic genes with closely related gene family members or retrotransposed pseudogenes are most sensitive to read alignment errors.
The absolute values of these patterns were sensitive to read length and likely reflected limits imposed by open reading frame prediction and BLAST/LAST-based annotation.
The utility of RNA-seq data generated is believed to be sensitive to read length, mapping and assembly of reads and statistical and computational challenges.
In summary, the method works best using paired-end reads with a length at least 37 nucleotides and allowing one mismatch in the mapping, and that calls are more sensitive to read length than the number of reads.
Sensitivity versus specificity curves show that the method works best using paired-end reads with length at least 37 nucleotides, that allowing one mismatch in the mapping is optimal, and that calls are more sensitive to read length than the number of reads.
Bowtie is, however, less sensitive to reads with multiple mismatches (David et al., 2011), although this is not a major consideration for microRNA analysis.
> Table 3 groups F3 and S1,1 into one category because both are full sensitive to reads with one SNP and one color error.
However, our reading frame-specific analyses indicate that compositional shifts are in some cases sensitive to reading frame, a finding that is not expected under a nucleotide-level-selection-only model.
Genes with more tissue variation rank higher Quantification of expression is sensitive to the read assignment method applied, such as the one used by Cufflinks, to distribute reads to expressed regions of isoforms over the whole gene.
> -wrap-foot> From Table 1, we can see that BWA-SW is clearly the fastest, several times faster than BLAT and SSAHA2 on all inputs, and its speed is not sensitive to the read length or error rates.
