Sentence examples for segments of the reference from inspiring English sources

As our samples have been aligned, getting the segments of the reference, the segments of other samples can be obtained from the correspondence of points.

Segments of the reference genome sequence aligning to the reads originally showing the mismatches were then aligned with the validation sequence for comparison of called with confirmed mismatches.

We define a 'collection of ROAs' as two tracks of abutting segments of the reference sequence with the starts of the two tracks offset by the overlap length.

Each pair of neighbouring fragment sequences is either i) output contiguously if they match contiguous segments of the reference sequence, or ii) output separated by a gap of length equal to distance between the respective matching segments of the reference sequence (see Figure 2 and Implementation).

The computational complexity of the inference can be reduced by detecting the segments of the reference genome at the ends of the chromosomes of the target genome and also the segments that are known to exist in the target genome.

The C2V4 segment of the reference sequence HIV-1 HXB2 (GenBank accession number K03455 ) [ 49] was used as an outgroup (gene location 7002 7400).

A polyp seen during CTC was considered true positive if (1) its appearance resembled the corresponding adenomatous or nonadenomatous polyp at colonoscopy, (2) its segment or adjacent segment corresponded with the segment of the reference standard and (3) the polyp size as estimated by the endoscopist corresponded with the CTC size, considering a margin of error of 50%.

Analysis of such experiments relies on the alignment of individual sequence segments to the reference genome.

We speculate that this is because many simple repeats (e.g., those near telomeres and centromeres) are designated as "N" in the reference human genome; hence, a random sampling of segments of the human reference assembly under represents its simple repeat content.

That this is indeed an artefact caused by how sequences of different lengths are aligned to the human genome is supported by the observation that the segments of the human reference genome to which the sequences are aligned reduce their fraction of derived alleles from 25.7 to 22.7% when the Neandertal sequences are shorter.

We assume that the target genome is a set of chromosomes, each of which is a concatenation of segments in the reference genome.