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Strains containing all eight RNA segments and for each segment a minimum 90% long of the coding sequence based on PR8 were included, which serve as the primary dataset for full genome scanning.
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It comprises a series of 6-sec segments of broadband white noise containing 0 to 3 gaps per noise segment with a minimum intergap interval of 500 msec.
The other parameter defined the size of the reported segment to a minimum size of 100 kbp.
The GFP intensities measured in the distal segments differed from those in proximal segments by a minimum of a 15-fold difference to a maximum of a 72-fold difference (mean = 39-fold difference; n = 10 nephrons; Figure 1C).
By setting the value of this parameter to five, we introduce constraints to only identify segments with a minimum of five SNPs within the segment.
The underlying problems are the theoretical presence of three segments, at a minimum, which can be placed in different positions and extensions or the analysis of six segments in different echo views.
Prior to threading, the ERev sequence was fragmented into overlapping segments with a minimum length of 60 residues and with starting positions every 5 residues.
Eye movement segments with a minimum velocity <img src="http://journals.plos.org/plosone/article/asset?id=info?doi/10.1371/journal.pone.0009127.e014.PNG" class= inline-graphic"/> and a minimum amplitude of <img src="http://journals.plos.org/plosone/article/asset?id=info:doi/10.1371/journal.pone.0009127.e015.PNG" class="inline-graphic"/> were classified as saccades.
Repeat-masked [ 39] alignments were subset to segments with a minimum of 85% sequence identity.
We selected as lesions segments with a minimum genomic size of 200 kb and with >20 SNP/CN-altered markers; considering that inherited genetic background could have a role in individual patient's response to treatment and survival, the segments overlapping with CN variations (CNVs) cataloged in CNVs' databases were taken into account.
We then utilized the copy number analysis module (CNAM) under the multivariate option to segment chromosomes with a maximum of 20 segments per window, a minimum of 3 markers per segment, and a significance level of p = 0.01 for pairwise permutations (n = 1,000) as described previously [ 41].
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