Sentence examples for seed step from inspiring English sources

Hits coming from the seed step are pipelined through the filters.

The seed step provides all potentially homologous areas in the genome with a given query sequence.

The goal of the filter step is to eliminate as many false positive alignments generated by the seed step as possible, and in the fastest possible way.

The SHRiMP implementation (Rumble et al., 2009) provides an improved seed step with spaced seeds and Q-gram filters to restrict the size of the candidate hit space.

The assembly was done with gsAssembler (Newbler v2.7, Roche Diagnostics Corporation, Basel, Switzerland) by considering the default parameters, including a minimum read length: 20; seed length: 16; seed step: 12; minimum overlap length: 40 and minimum overlap identity: 90.

Briefly, the initial sequencing dataset was assembled using Newbler 2.6 (Roche Ltd) and default parameters for cDNA data (seed step = 12; seed length = 16, seed count = 1, minimum overlap length = 40, and minimum overlap identity = 90%).

Larsson twice served for the first set but, after squandering opportunities at 5-4 and then 6-5, the Swede was punished as the second seed stepped up a level, winning the tie-break before breaking in the third game of the second set to assume complete control.

We introduce a new simulated annealing-based weighted graph matching algorithm for the seeding step of de-anonymization.

The translation of one-step TE approaches to clinical application has generally failed so far due to the requirement of a prolonged cell seeding step before implantation.

The effects of various depositing conditions, including methane concentration, temperature, pressure, the diamond seeding step and reaction time, on diamond growth were investigated in detail.

The bulk of it takes place in the autumn months, when Seaward and his crew embark on an eight-step renovathat that includes irrigation (Step 1), aeration (Step 2) and seeding (Step 4).