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The speed gains from FASTA/BLAST and the vast majority of popular modern derivatives such as BLASTZ [10] come from storing the seed index in a hash table where look-up of a given seed is constant time.
Seed index (SI): Seed index is described as the weight of 100 seeds in grams [ 51].
Additionally, the sequences not positioned on the reference genome are collected to establish the vacancy seed index.
The paired reads from the largest insert size library (ARs) were then used to query the spaced seed index to find all possible overlapping SRs from the smaller insert size libraries.
The traits included the number of bolls per plant (BN), seed cotton weight per boll (SCW), lint weight per boll (LW), lint percentage (LP), lint index (LI), seed index (SI), fibre length (FL, mm), fibre strength (FS, cN/tex), fibre length uniformity ratio (FU), fibre elongation (FE), and fibre micronaire (MV).
Similar(55)
where, Cc: centralized cluster medoids; k1: cluster seed indexes; v1: seed values; ci: clusters per map process; ni: number of instances per cluster; mci: merged respective clusters per mappers; mni: number of instances per merged clusters.
The Access to Seeds Index says one billion people currently go to bed hungry and two billion people suffer from malnutrition.
The Access to Seeds Index said the large multinational companies' quality and range of seeds, if available and affordable, could help boost yields.
"It is often thought that smallholding farmers save their seeds from season to season but that is not true," said Access to Seeds Index executive director Ido Verhagen.
The values of seed vigour index, Tolerance index and percentage of phytotoxicity were also calculated.
The morphological parameters such as germination percentage, shoot length, root length, fresh weight and dry weight of seedlings, seed vigour index, tolerance index and percentage of phytotoxicity were calculated.
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